This page contains the details of a technical writing project accepted for Season of Docs.
- Open source organization:
- National Resource for Network Biology (NRNB)
- Technical writer:
- Project name:
- Replacing GUI control tutorials to Jupyter Notebook and R Markdown
- Project length:
- Standard length (3 months)
The tutorials at https://github.com/cytoscape/cytoscape-tutorials/wiki are great but most of them are GUI based and not automated in Python or R.
I will write the contents of Cytoscape tutorials in both Python and R as much as possible, and make the Jupyter Notebook and R Markdown gallery site. The design of those sites will look like https://plot.ly/ipython-notebooks/ and https://rmarkdown.rstudio.com/gallery.html.
To maintain consistency of the new content, I will use CI services and https://github.com/cytoscape/docker-cytoscape-desktop (i.e. automate running the Jupyter Notebook and R Markdown).